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Species belonging to selected taxon:

Bos taurus, Bos indicus, Bos sp.



ABOUT THIS RECORD

ID: MNEST005413
species: Bos taurus
miRNA family: mir-133
source: miRNEST

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGTCCCCTTCAACCAGCTA

miRNA*
GCTGGTCAAACGGAACCAAGT

mismatches: 4
bulges: 0

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pre-miRNA
CCCCCTGCTCTGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTACAGCAGGGC

dot-bracket secondary structure
..(((((((.((((((((..((.((.((((((.((.((((...)))))))))))).)).))..)))))))).))))))).


SIMILARITIES
miRBase mml-mir-133b: 4e-40

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-133: 6e-39
most similar mature miRNAs

Identical with: ptr-mir-133b from miRBase (MNEST030222)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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