ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-22
source: miRNEST
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGCTGCCAGTTGAAGAACTG miRNA* GTTCTTCAGTGGCAAGCTTTA mismatches: 0 bulges: 2 |
pre-miRNA
GAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTC
dot-bracket secondary structure
(((..((((((((((((((((((((.((((((....(((...))).))))))))))).))))))))))))))).)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTC
dot-bracket secondary structure
(((..((((((((((((((((((((.((((((....(((...))).))))))))))).))))))))))))))).)))
SIMILARITIES| miRBase eca-mir-22: 2e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-22: 4e-37 | most similar mature miRNAs |
Identical with: mne-mir-22 from miRBase (MNEST028181) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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