miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Bos taurus, Ovis aries, Bos indicus, Bos sp., Capra hircus



ABOUT THIS RECORD

ID: MNEST005419
species: Bos taurus
miRNA family: let-7
source: miRNEST

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGAGGTAGTAGGTTGCATAGT

miRNA*
TATACGACCTGCTGCCTTTC

mismatches: 1
bulges: 1

View larger
pre-miRNA
AAGAAAAAAATGGGTTCCTAAGAAGAGGTAGTAGGTTGCATAGTTTTCGGGCAGGGATTTTGCCCACAAGGAGGTAACTATACGACCTGCTGCCTTTCTT
AGGGCCTTATTATACCAC


dot-bracket secondary structure
........((((((.(((((((((.(((((((((((((.((((((.((((((((.....)))))).......)).)))))).))))))))))))))))))
)))).)))))).......



SIMILARITIES
miRBase mmu-let-7d: 6e-43

PMRD no hits

microPC no hits
UniProt no hits

RFAM let-7: 9e-30
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;