miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Bos taurus, Bos indicus, Bos sp.



ABOUT THIS RECORD

ID: MNEST005420
species: Bos taurus
miRNA family: mir-1
source: miRNEST

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAATGTAAAGAAGTATGT

miRNA*
 ATACTTCTTTATGTACCCATA

mismatches: 1
bulges: 1
View larger
pre-miRNA
 TTAGTAATACCTACTCAGAGTACATACTTCTTTATGTACCCATATGAACATACAATGCTATGGAATGTAAAGAAGTATGTATTTTTGGTAGGCAATAAAC


dot-bracket secondary structure
.........((((((.(((((((((((((((((((((..(((((..............))))).))))))))))))))))))))).))))))........



SIMILARITIES
miRBase hsa-mir-1-2: 5e-43

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-1: 3e-32		most similar mature miRNAs

Identical with: ptr-mir-1-2 from miRBase (MNEST030138)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;