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Species belonging to selected taxon:

Bos taurus, Ovis aries, Bos indicus, Bos sp., Capra hircus



ABOUT THIS RECORD

ID: MNEST005421
species: Bos taurus
miRNA family: miR-1
source: miRNEST

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTACATACTTCTTTATGTACC

miRNA*
 ATGTAAAGAAGTATGTATTT

mismatches: 2
bulges: 0
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pre-miRNA
 ACTTAGTAATACCTACTCAGAGTACATACTTCTTTATGTACCCATATGAACATACAATGCTATGGAATGTAAAGAAGTATGTATTTTTGGTAGGCAATAA
ACCA

dot-bracket secondary structure
...........((((((.(((((((((((((((((((((..(((((..............))))).))))))))))))))))))))).))))))......
....


SIMILARITIES
miRBase hsa-mir-1-2: 5e-43

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-1: 3e-32		most similar mature miRNAs

Identical with: ptr-mir-1-2 from miRBase (MNEST030138)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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