miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Sus scrofa, Bos taurus, Canis lupus familiaris, Ovis aries, Ursus americanus, Equus caballus, Bos indicus, Bos sp., Capra hircus



ABOUT THIS RECORD

ID: MNEST005426
species: Bos taurus
miRNA family: mir-9
source: miRNEST

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTTTGGTTATCTAGCTGTAT

miRNA*
 AAAGCTAGATAACCGAAAGTA

mismatches: 2
bulges: 0
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pre-miRNA
 GTGAGGGAAGCGAGTTGTTATCTTTGGTTATCTAGCTGTATGAGTGTATTGGTCTTCATAAAGCTAGATAACCGAAAGTAAAAACTCCTTCAAGGGC

dot-bracket secondary structure
......((((.(((((.((((.(((((((((((((((.((((((..........)))))).))))))))))))))).)))).)))))))))......


SIMILARITIES
miRBase rno-mir-3597-2: 2e-48

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-9: 2e-17		most similar mature miRNAs

Identical with: mml-mir-9-2 from miRBase (MNEST027646)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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