miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Sus scrofa, Bos taurus, Ovis aries, Bos indicus, Bos sp., Capra hircus



ABOUT THIS RECORD

ID: MNEST005436
species: Bos taurus
miRNA family: mir-339
source: miRNEST

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCCTGTCCTCCAGGAGCTTA

miRNA*
 AGATCAGTGAGGACAGGGACC

mismatches: 5
bulges: 0
View larger
pre-miRNA
 TTTATTTTTAGTAGAGGCGGTCCCTGTCCTCCAGGAGCTTACAATCTAGCCGGGGAGACACAACTAATGCACACTTATTCAATCATTACAATTAGCAATT
ACAATTAGCAATTACCACAATATTGACCACAATTGCATGAGACCTGGGGGATTCAAGATCAGTGAGGACAGGGACCGCCTCAAAA

dot-bracket secondary structure
.............((((((((((((((((((...((.(((..(((((..(((((.........((.(((((.......(((((......((((.((....
.......))))))........))))).......))))).)).))))).))))).))).))...))))))))))))))))))....


SIMILARITIES
miRBase sla-mir-28: 0.000009

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-28: 0.00004		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;