ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-1842
source: miRNEST
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCTCTGTGAGGTCGGCTCA miRNA* AGCAGGCCTGTCAGGGNCGTT mismatches: 4 bulges: 0 |
pre-miRNA
TGAGGTTGGTGGTCCTGACGTTGGCTCTGTGAGGTCGGCTCAAGGTGGGTCTGGATGTTGAGCAGGCCTGTCAGGGNCGTTGTCACCCACACCAGGAGC
dot-bracket secondary structure
.....((((((....(((((.((.(((((..(((((.((((((.((........)).)))))).)))))..))))).)).)))))....))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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TGAGGTTGGTGGTCCTGACGTTGGCTCTGTGAGGTCGGCTCAAGGTGGGTCTGGATGTTGAGCAGGCCTGTCAGGGNCGTTGTCACCCACACCAGGAGC
dot-bracket secondary structure
.....((((((....(((((.((.(((((..(((((.((((((.((........)).)))))).)))))..))))).)).)))))....))))))....
SIMILARITIES| miRBase eca-mir-1842: 9e-23 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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