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Species belonging to selected taxon:
Danio rerio
,
Pimephales promelas
,
Cyprinus carpio
,
Rutilus rutilus
ABOUT THIS RECORD
ID:
MNEST005480
species:
Danio rerio
miRNA family:
miR-2321
source:
miRNEST
Taxonomy by NCBI:
Danio rerio
Danio
Cyprinidae
Cyprinoidea
Cypriniformes
Cypriniphysi
Otophysi
Ostariophysi
Otocephala
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGGTTGGTTTTTGTTTGG
miRNA*
GACGTGATTCGGCTTAACTG
mismatches:
4
bulges:
1
View larger
pre-miRNA
ACTTTTATTTCTATTTATGGNC
GACGTGATTCGGCTTAACTG
AAAAAAAGAATCTACATTTAGATGGAGCAGATGCCTCCGCTCTGGTCTGTGATCCCCA
ATGCTTTCTTTTTAGTTTGG
TTTGGGTTGGTTTTTGTTTGG
NGTAAATATAAAAGGGGGC
dot-bracket secondary structure
.(((((.(((.(((((((...(
((((.((.((((((((((((
((((((((((........((((((((((.((....)).))))).))))).........
.....))))))))..)))))
.))))))))).)).)).))).
.))))))).))).))))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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