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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST055060
species: Zea mays
miRNA family: MIR393
source: PMRD, original name: zma-miR393d

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCAAAGGGATTGCACTGATC

miRNA*
 TCAATGCGATCCCTTTGGAGT

mismatches: 1
bulges: 0
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pre-miRNA
 ATTCCAAAGGGATTGCACTGATCTTGTCGTCGACTCGCATCGCATGCAGCAGGCGGCAGGTGAGAATAGATCAATGCGATCCCTTTGGAGT

dot-bracket secondary structure
(((((((((((((((((.(((((((((((((..((.((((...))))))..))))))).........)))))).)))))))))))))))))


SIMILARITIES
miRBase zma-MIR393a: 1e-46

PMRD zma-miR393: 1e-46

microPC miR393: 0.000004		UniProt no hits

RFAM no hits

Identical with: zma-MIR393a from miRBase (MNEST042786)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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