miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea glauca



ABOUT THIS RECORD

ID: MNEST055386
species: Picea glauca
miRNA family: miR3710
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGGAACCTGACGGGCCTCCA

miRNA*
 GGAACCTGACGGGCCTCCTAAG

mismatches: 4
bulges: 1
View larger
pre-miRNA
 GCTACACTCTGCAGACGCTTCCAGACTCGTTTGGGAACCTGACGGGCCTCCAAAGTCTTAAAATGCACACTTGCTGCGCTTTGCAGACGCTTCCAGACTC
TGTTGGGAACCTGACGGGCCTCCAAAGTCTTAACATGTCCAATTGCTCCACTCTGCAAGCGCTTCCAGACTCGGTTGGGAACCTGACGGGCCTCCTAAGT
CTTGACATGTCCCTTTGCTTCACTCTG

dot-bracket secondary structure
..........(((((((..((.(((((....(((((.((((.((((..((((((((((..((..(((....))).((((((.(((((.((.....(((..
((((((((..((...((....))..)))))))))).))).....)).....)))))))))))))..)))))...)))))..)))).))))..))))))))
)).))..))))....))).........


SIMILARITIES
miRBase pab-MIR3710: 4e-36

PMRD pta-miR1315: 0.00000001

microPC no hits		UniProt sp|Q7XA42|RGA1_SOLBU: 0.00000003

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




Liczniki na strone;