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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Linum usitatissimum, Manihot esculenta, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Bruguiera gymnorhiza, Populus trichocarpa, Ricinus communis, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST055389
species: Populus tremula
miRNA family: MIRf144
source: miRNEST

Taxonomy by NCBI:
Populus tremula Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGAGCTTGTTTGGTAGCCAAG

miRNA*
 TGGCTAACTGACAAGCTCTTA

mismatches: 3
bulges: 0
View larger
pre-miRNA
 AAATTCGAGACGATAGCCTTACATGAAGATAAGAGCTTGTTTGGTAGCCAAGGACGACTTGTCCGCCACCATCTTAGTTAGTTCCAGTATAATATTACTG
GGCACCTTCCATTTGGTTTTGGGCAAGCACCTTGGCTAACTGACAAGCTCTTATCAATCATGCTAGGCTCTTTTTCTCTTC

dot-bracket secondary structure
......((((.((.(((((..(((((.((((((((((((((...(((((((((....((((((((..((((...........(((((((......)))))
))...........))))..))))))))..)))))))))...))))))))))))))..)))))..)))))..)).))))...


SIMILARITIES
miRBase ptc-MIR169af: 3e-36

PMRD ptc-miRf12009-akr: 4e-51

microPC no hits		UniProt no hits

RFAM MIR169_5: 7e-44		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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