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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000557
species: Elaeis guineensis
miRNA family: MIR398
source: miRNEST

Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTTCTCAGGTCGCCCCTG

miRNA*
 GGGGCGACCTGCGACCACACG

mismatches: 2
bulges: 0
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pre-miRNA
 TCCAACAGGGGCGACCTGCGACCACACGAGCTGAAGTCCTTCATCGAAATCTCGTCCCTCGATTGCTGCAATCGGACGGTGCCCGTGTGTTCTCAGGTCG
CCCCTGCCGGGCCTT

dot-bracket secondary structure
(((..(((((((((((((.((.((((((.((.((..((.......))..))((((((...(((((...))))))))))).)).)))))).)).)))))))
))))))..)))....


SIMILARITIES
miRBase osa-MIR398b: 0.000000006

PMRD osa-miR398b: 0.000000006

microPC miR398: 2e-52		UniProt no hits

RFAM MIR398: 0.0000001		most similar mature miRNAs

Identical with: miR398 from microPC (MNEST046795)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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