ABOUT THIS RECORDspecies: Ciona intestinalis
miRNA family: miR-4275
source: miRNEST
Taxonomy by NCBI:
Ciona intestinalis Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAATTACCACTTCTTCATTG miRNA* ATGAGGTGTAGTCAAATGAGC mismatches: 3 bulges: 2 |
pre-miRNA
CATTTCTTGGCTCAATTACCACTTCTTCATTGTTGTATGTAGTTTTATCAAAAACAAACTGCCCGCCTTTAAAATCACTTCCATAGTCTGCTANATAGAG
TAATGAGGTGTAGTCAAATGAGCCATATTGT
dot-bracket secondary structure
.......(((((((.((((.((..((((((((((.(((.((((.((((..................................))))...)))).))).))
)))))))).)).)).)).)))))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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CATTTCTTGGCTCAATTACCACTTCTTCATTGTTGTATGTAGTTTTATCAAAAACAAACTGCCCGCCTTTAAAATCACTTCCATAGTCTGCTANATAGAG
TAATGAGGTGTAGTCAAATGAGCCATATTGT
dot-bracket secondary structure
.......(((((((.((((.((..((((((((((.(((.((((.((((..................................))))...)))).))).))
)))))))).)).)).)).)))))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q5XGE0|CQ101_XENTR: 0.00001 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
