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Species belonging to selected taxon:
Ciona intestinalis
,
Ciona savignyi
ABOUT THIS RECORD
ID:
MNEST005574
species:
Ciona intestinalis
miRNA family:
miR-4179
source:
miRNEST
Taxonomy by NCBI:
Ciona intestinalis
Ciona
Cionidae
Phlebobranchia
Enterogona
Ascidiacea
Tunicata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGCCTCATCTGGTATAAACTT
miRNA*
GTTTTACACCAGATGAGTCGAA
mismatches:
4
bulges:
1
View larger
pre-miRNA
TTATAAAATCTAATAGTTTTT
CGCCTCATCTGGTATAAACTT
TAATTTACATTTATTTCAGTGATATCACATGTTTAGTGTTGTGATGTCAACCTTGATG
AAGTCTTGCCGAATAGCAGACACAACATTGGAATAAAATTAATG
GTTTTACACCAGATGAGTCGAA
AAAGATTATTTTATATTT
dot-bracket secondary structure
.(((((((..((((..(((((
((.((((((((((..(((((.
....(((..(((((((((.((((((((((..........))))))))))....((.((
..((((.((......)))))).)).)).)))))))))..))).)
))))...)))))))))).))))
))).)))))))))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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