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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST000560
species: Elaeis guineensis
miRNA family: MIRf1372
source: miRNEST

Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGCGAGCTTCTCGAAGATGTC

miRNA*
 GCTTCGCAAGCTCGCCGG

mismatches: 5
bulges: 1
View larger
pre-miRNA
 TCCGAGACAGCGTGCTTCGCAAGCTCGCCGGGAAGGACGAGGCGGACAGAGGTCTGAATCTCCCGGGAGGTAATTGTAGGCTTCTTATTGTAGCGGGCAA
GCTTGGACGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAG

dot-bracket secondary structure
.......(((((..(((((.(((((((((((((.....((..(((((....)))))..))))))(((((((.....((((((((((........))).))
)))))...))))))).)))))))))..)))))....)))))......


SIMILARITIES
miRBase no hits

PMRD osa-miRf10132-akr: 3e-36

microPC no hits		UniProt sp|Q9SI96|H2B3_ARATH: 4e-19

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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