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Species belonging to selected taxon:
Ciona intestinalis
,
Ciona savignyi
ABOUT THIS RECORD
ID:
MNEST005639
species:
Ciona intestinalis
miRNA family:
miR-4186
source:
miRNEST
Taxonomy by NCBI:
Ciona intestinalis
Ciona
Cionidae
Phlebobranchia
Enterogona
Ascidiacea
Tunicata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTAGATGAGACAAGAGTGAGT
miRNA*
TCACTCCTGTCCCATCCAACA
mismatches:
5
bulges:
0
View larger
pre-miRNA
AGAATGAGTGTCACAAGTACTAAGCTGGTCTTTATATAACAC
TCACTCCTGTCCCATCCAACA
CCGAGGATGGTGCAGTTTCAGTTAATCAACTTTAACC
ATCCTCGGTG
CTAGATGAGACAAGAGTGAGT
GTTATATTAATACCAGGTATTGTGACACTCACTCTTAAA
dot-bracket secondary structure
(((.((((((((((((.((((....((((.((.(((((((((
((((((.((((.((((...((
(((((((((((..((((..........))))...)))
))))))))))
...)))).)))).))))))))
))))))).)).)))))))))))))))))))).)))....
SIMILARITIES
miRBase
cin-mir-4186
:
0.00003
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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