miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Oryctolagus cuniculus, Cavia porcellus, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST005648
species: Rattus norvegicus
miRNA family: miR-675
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTGCCCTAACCGCTCAAT

miRNA*
 TGGTGCGGANAGGGCCCACANT

mismatches: 4
bulges: 1
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pre-miRNA
 TGAAGCACTGCGGCCCNGGGACTGGTGCGGANAGGGCCCACANTGGACTTGGTGCACTGTGTGCCCTAACCGCTCAATCCCTGGGTCTGGCATGACA

dot-bracket secondary structure
........((((((((.((((.(((.((((..(((((.((((.((.((...)).)).)))).)))))..))))))).)))).)))))..))).....


SIMILARITIES
miRBase rno-mir-675: 3e-32

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-675: 0.000000000006		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record




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