ABOUT THIS RECORDspecies: Rattus norvegicus
miRNA family: miR-675
source: miRNEST
Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGTGCCCTAACCGCTCAAT miRNA* TGGTGCGGANAGGGCCCACANT mismatches: 4 bulges: 1 |
pre-miRNA
TGAAGCACTGCGGCCCNGGGACTGGTGCGGANAGGGCCCACANTGGACTTGGTGCACTGTGTGCCCTAACCGCTCAATCCCTGGGTCTGGCATGACA
dot-bracket secondary structure
........((((((((.((((.(((.((((..(((((.((((.((.((...)).)).)))).)))))..))))))).)))).)))))..))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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TGAAGCACTGCGGCCCNGGGACTGGTGCGGANAGGGCCCACANTGGACTTGGTGCACTGTGTGCCCTAACCGCTCAATCCCTGGGTCTGGCATGACA
dot-bracket secondary structure
........((((((((.((((.(((.((((..(((((.((((.((.((...)).)).)))).)))))..))))))).)))).)))))..))).....
SIMILARITIES| miRBase rno-mir-675: 3e-32 PMRD no hits microPC no hits | UniProt no hits RFAM mir-675: 0.000000000006 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
