ABOUT THIS RECORDspecies: Rattus norvegicus
miRNA family: mir-466
source: miRNEST
Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATGTGTGTGAACATGTACCT miRNA* GTACATGTGTGTGCATGTGTA mismatches: 1 bulges: 0 |
pre-miRNA
GATTAGCGTGGTCGCGGCCGAGGTACATGTGTGTGCATGTGTATGTGTGTGTGCATGTGTGTGTATGTGTGTGAACATGTACCTGCCCGGGCGGCCGCTC
GAA
dot-bracket secondary structure
.......(((((((((((..((((((((((.(((((((((((((((((....)))))))....)))))))))).)))))))))))))...))))))))..
...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATTAGCGTGGTCGCGGCCGAGGTACATGTGTGTGCATGTGTATGTGTGTGTGCATGTGTGTGTATGTGTGTGAACATGTACCTGCCCGGGCGGCCGCTC
GAA
dot-bracket secondary structure
.......(((((((((((..((((((((((.(((((((((((((((((....)))))))....)))))))))).)))))))))))))...))))))))..
...
SIMILARITIES| miRBase tae-MIR1120: 0.0003 PMRD tae-miR1120: 0.0003 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
