miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Cavia porcellus, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST005651
species: Rattus norvegicus
miRNA family: mir-466
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATGTGTGTGAACATGTACCT

miRNA*
 GTACATGTGTGTGCATGTGTA

mismatches: 1
bulges: 0
View larger
pre-miRNA
 GATTAGCGTGGTCGCGGCCGAGGTACATGTGTGTGCATGTGTATGTGTGTGTGCATGTGTGTGTATGTGTGTGAACATGTACCTGCCCGGGCGGCCGCTC
GAA

dot-bracket secondary structure
.......(((((((((((..((((((((((.(((((((((((((((((....)))))))....)))))))))).)))))))))))))...))))))))..
...


SIMILARITIES
miRBase tae-MIR1120: 0.0003

PMRD tae-miR1120: 0.0003

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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