miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST005652
species: Rattus norvegicus
miRNA family: miR-2301
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTGGTTTTGGTTTCCAGCTTC

miRNA*
 AGTTGGAAGGTAAAAACATTA

mismatches: 2
bulges: 0
View larger
pre-miRNA
 TTCTTAACTTGAAGTTGGAAGGTAAAAACATTAGTTTATGCAAGAGTAGATTCTAAGAGGGTATTTGGCACAATATATTGTCCTAATAAGTTTGGGAAAC
ACTGGATCATGCAAAGCTGACTTGCTGTAGGCTTTTCAGAACCTTTGATGTGTAAATGTGTGGTTTTGGTTTCCAGCTTCAGAGATGTT

dot-bracket secondary structure
.((((....((((((((((((.(((((.(((..(((((((((..(((...(((((((....((((.((.((((....)))))).))))..)))))))...
)))((.((.((.((((((.((.....)).)))))).)))).)).....)))))))))..))).))))).))))))))))))))))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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