ABOUT THIS RECORDspecies: Eragrostis curvula
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Eragrostis curvula Eragrostis Eragrostidinae Eragrostideae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCCTCTGTCCCAGAATATTT miRNA* TTAAACTGGGACGGAGGGAGT mismatches: 3 bulges: 0 |
pre-miRNA
ATGCCATGTACTCCCTCTGTCCCAGAATATTTGTCATTCTGGCTTTTTACCAGATATGGACAATCTGTACGTCCAGATTCATTGAACATTCTATGAATCC
TGGACCCTCCAAACACTCCCAGAATGACAATTAAACTGGGACGGAGGGAGTAGTAAGTT
dot-bracket secondary structure
........(((((((((((((((((..((.((((((((((((..........((((((((...)))))).((((((((((((.((....)).)))))).)
)))))..)).........)))))))))))).))..))))))))))))))))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGCCATGTACTCCCTCTGTCCCAGAATATTTGTCATTCTGGCTTTTTACCAGATATGGACAATCTGTACGTCCAGATTCATTGAACATTCTATGAATCC
TGGACCCTCCAAACACTCCCAGAATGACAATTAAACTGGGACGGAGGGAGTAGTAAGTT
dot-bracket secondary structure
........(((((((((((((((((..((.((((((((((((..........((((((((...)))))).((((((((((((.((....)).)))))).)
)))))..)).........)))))))))))).))..))))))))))))))))).......
SIMILARITIES| miRBase no hits PMRD osa-miRf11202-akr: 0.0001 microPC no hits | UniProt no hits RFAM MIR1122: 0.000009 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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