miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Eschscholzia californica, Papaver somniferum



ABOUT THIS RECORD

ID: MNEST000567
species: Eschscholzia californica
miRNA family: MIR1446
source: miRNEST

Taxonomy by NCBI:
Eschscholzia californica Eschscholzia Eschscholzioideae Papaveraceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATCTGATCTCTCTCCCTCAAA

miRNA*
 TCAGTGATAGATCGGGGAT

mismatches: 4
bulges: 2
View larger
pre-miRNA
 GAAATTTTCAGTGATAGATCGGGGATATGAACTTTGAAATTCATCAATTGTCGATCTGATTGTTTCTCTAATCGATTATTTGATAAGTTTTTCGGCGGAT
TTTGAGGAGTTTTATCAAAACCAGATTCTGAATCTGATCTCTCTCCCTCAAAAGAAAAAAA

dot-bracket secondary structure
....((((.((.((.((((((((.....(((((..((((((.(((((..((((((..((.......))..))))))...))))).))))))..)).((.(
(((((.........))))))))...)))....)))))))).))...)).))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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