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Species belonging to selected taxon:
Aquilegia formosa x Aquilegia pubescens
,
Eschscholzia californica
,
Papaver somniferum
ABOUT THIS RECORD
ID:
MNEST000057
species:
Aquilegia formosa x Aquilegia pubescens
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Aquilegia formosa x Aquilegia pubescens
Aquilegia
Ranunculaceae
Ranunculales
stem eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTCCCTCTGTCCCAAATT
miRNA*
TTTGGGACGGAGGGAGTATGA
mismatches:
0
bulges:
0
View larger
pre-miRNA
ATGTACAACATTGTTTATTTG
ATACTCCCTCTGTCCCAAATT
ATAAGTACCTTATTCCATTTTAGATTGTCCCAAAATATATGTCGCTTTTGACTTTTCA
ACACATATTAATTAAGTTAAATGGTTCATTTGTCTATACTATCCTTGCTTTAAGATTAGAGTAATTATTCTAATGAAAAGTTAGACATTGTAATTAGTAT
TAAATAGGGGTAAATTAGAAAATAGAATTAGTAGACAAACAATAAATGATGTTTCCTTAATAAATAGAATATTCTAAAAGGTACTTATAA
TTTGGGACGG
AGGGAGTATGA
ACAAACAGTATCTTTATT
dot-bracket secondary structure
.........(((((((.(((.
(((((((((((((((((((((
(((((((((((.(((.(((((.((((..(((....(((.((..(((((((((((....
.............)))))))).((((((..((((((..........(((((...((((((((....))))))))..))))))))))).)).)))))))..
)).))).)))..))))..))))).)))(((.(((..(((((........)))))..))).))).((((....)))).)))))))))))))
))))))))))
)))))))))))
).))))))).........
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11090-akr
:
0.00007
microPC
miR1439
:
0.00007
UniProt
no hits
RFAM
MIR1122: 0.000005
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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