ABOUT THIS RECORDspecies: Eucalyptus globulus
miRNA family: miR167h
source: miRNEST
Taxonomy by NCBI:
Eucalyptus globulus Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GATCATGTGGCAGCTTCACCT miRNA* ATGAAGCTGCCAGCGTGATCTC mismatches: 1 bulges: 1 |
pre-miRNA
CATCGCGCACCACTATCAGATGAAGCTGCCAGCGTGATCTCAACTTTTCTGGTCTCTTAAAGGAAAGATCAGATCATGTGGCAGCTTCACCTGTTGCTGG
GAGCTCGA
dot-bracket secondary structure
..(((.((.(((.((.(((.(((((((((((.((((((((...(((((((..........)))))))...))))))))))))))))))).))).)).)))
..)).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CATCGCGCACCACTATCAGATGAAGCTGCCAGCGTGATCTCAACTTTTCTGGTCTCTTAAAGGAAAGATCAGATCATGTGGCAGCTTCACCTGTTGCTGG
GAGCTCGA
dot-bracket secondary structure
..(((.((.(((.((.(((.(((((((((((.((((((((...(((((((..........)))))))...))))))))))))))))))).))).)).)))
..)).)))
SIMILARITIES| miRBase csi-MIR167b: 0.000000000001 PMRD vvi-miR167c: 0.0000000003 microPC miR167: 2e-33 | UniProt no hits RFAM MIR167_1: 0.0000000001 | most similar mature miRNAs |
Identical with: miR167 from microPC (MNEST045268) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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