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Species belonging to selected taxon:

Eucalyptus globulus, Eucalyptus gunnii



ABOUT THIS RECORD

ID: MNEST000576
species: Eucalyptus gunnii
miRNA family: MIR398
source: miRNEST

Taxonomy by NCBI:
Eucalyptus gunnii Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTTTTCAGGTCACCCCTT

miRNA*
 TGGGTGATCTTGGTAACACAGG

mismatches: 2
bulges: 1
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pre-miRNA
 TTAGAAAGGGAGGCATCTCCGATGGGTGATCTTGGTAACACAGGCGCTGTTCCTTTGCGTGTATTCGTATTTGTCCATATGATTCGTGCTATTACATCAG
CGCCTGTGTTTTCAGGTCACCCCTTTGAGATGATCACATTCTTT

dot-bracket secondary structure
..((((...((..((((((.((.((((((.(((((.(((((((((((((.......(((((...((((((......))))))..)))))........)))
)))))))))).))))))))))).)).)))))).))...))))..


SIMILARITIES
miRBase mtr-MIR398a: 0.0001

PMRD gma-miR398b: 0.0001

microPC miR398: 3e-54		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: miR398 from microPC (MNEST046008)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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