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Species belonging to selected taxon:
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST005845
species:
Triticum aestivum
miRNA family:
MIR838
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTTTCTTCTACTTCATGCAAT
miRNA*
TTCATGAAATGGGTCAATGT
mismatches:
5
bulges:
1
View larger
pre-miRNA
ACTGGCACCTCTATAAATCCCTACTTCCCTCTGCGAAGGGC
CTTTCTTCTACTTCATGCAAT
TATTATTTTTGAATTTGAGTCTCCATCTTATCTTATAA
AGCACCAATTTAGAGGCACTATGATCGTACTTGAGCATTGGGGTAGCTAATATGCGAGTGTGT
TTCATGAAATGGGTCAATGT
TTGAGCATGATGGGCTA
GGGATAACTTACTTTATCATT
dot-bracket secondary structure
................(((((((..(((.(((((...((((
.((...((((.((((((.(((
...(((((.((.(((.....(((((.((((..(((((.
.((............))..))))).......))))...))))).....))).)).))))).))
).)))))).))))..)).))
))..))).)).))).))
)))))................
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record