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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST005846
species: Triticum aestivum
miRNA family: MIR319
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTGGACTGAAGTGAGCTCCCT

miRNA*
 GGAGCTCCCTTCAGTCCAAGC

mismatches: 2
bulges: 0
View larger
pre-miRNA
 AGATGAGGGAGCTCCCTTCAGTCCAAGCATGGAGGAGGAAAGAGAGAACAATCTCCCGCTGCATTCGCTCATTCGCACAGTACATATTGTAACATACTGG
TATGCCCTGGACTAGTCTCATATCTACTGTGTGCTCGAGTGAATGAGTCGGCAGCTCGTTCAATCCCCGCTACCTCCCATGAGTGGACTGAAGTGAGCTC
CCTCAAA

dot-bracket secondary structure
...(((((((((((.((((((((((..((((((((.((...((..((((...((.(((((.(((((((((...(((((((((.((((.(......(((((
(.........))))))..))))).)))))))))...))))))))))).))).))...))))..))....)).))).)))))..)))))))))).))))))
)))))..


SIMILARITIES
miRBase tae-MIR319: 2e-115

PMRD tae-miR319a: 6e-109

microPC miR319: 0.0000007		UniProt no hits

RFAM MIR159: 0.00001		most similar mature miRNAs

Identical with: tae-MIR319 from miRBase (MNEST042642)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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