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Species belonging to selected taxon:

Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST005942
species: Triticum aestivum
miRNA family: MIR1127
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCCTCCGTTCGGAATTACTT

miRNA*
 GTAATTCCGAATGGAGGGAGT

mismatches: 0
bulges: 0
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pre-miRNA
 GTTGATACTACTCCCTCCGTTCGGAATTACTTGTCGCAGAAATAGATGTATCTAGACGTATTTTAGTTCTAGATACATCCATATCCGAGACAAGTAATTC
CGAATGGAGGGAGTAGATACTA

dot-bracket secondary structure
.......((((((((((((((((((((((((((((...((.((.((((((((((((...((....)))))))))))))).)).))...))))))))))))
))))))))))))))))......


SIMILARITIES
miRBase tae-MIR1135: 3e-57

PMRD tae-miR1135: 3e-57

microPC miR1135: 4e-38		UniProt no hits

RFAM MIR1122: 2e-43		most similar mature miRNAs

Identical with: tae-miR1135 from PMRD (MNEST054710)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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