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Species belonging to selected taxon:

Triticum aestivum



ABOUT THIS RECORD

ID: MNEST005946
species: Triticum aestivum
miRNA family: MIR1127
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCCTCCGTTCGGAATTACTT

miRNA*
 GTAATTCCGAAAGAAGGGAGT

mismatches: 3
bulges: 0
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pre-miRNA
 ATGTAGTTATGACGCGCAATATTGTTATTTTTACTGCTTATTATTTGCTACTCCCTCCGTTCGGAATTACTTGTCACAAAAATGGATGTATCTACAACTA
AAATACATCTAGATACATTCATTTTTTGGACGAGTAATTCCGAAAGAAGGGAGTATGTGTTAGTGTGAAATATTAACATTTGCTTGTTGGACCGTTGGGT
CA

dot-bracket secondary structure
..........((((.((((...(((((.((((((.(((...(((....((((((((...((((((((((((((((..(((((((((((((((((......
.........)))))))))))))))))..))))))))))))))))...)))))))).)))..)))))))))...))))).)))).)))).((((....)))
).


SIMILARITIES
miRBase tae-MIR1127: 5e-26

PMRD tae-miR1127: 5e-26

microPC miR1128: 1e-32		UniProt no hits

RFAM MIR1122: 2e-38		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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