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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST005947
species: Triticum aestivum
miRNA family: MIR1127
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCCTCCGTTCGGAATTACTT

miRNA*
 GTAATTCNGAACGGAGAGAAT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 TTGTGTAGTACTCCCTCCGTTCGGAATTACTTGTCTCGGAAATGGATGTATCTAAAACTGAAATACATCTAGATACATTCATTTCCGCGACAAGTAATTC
NGAACGGAGAGAATACAAATAA

dot-bracket secondary structure
.......(((.((.((((((((.((((((((((((.((((((((((((((((((...............)))))))))))))))))).))))))))))))
.)))))))).)).)))......


SIMILARITIES
miRBase tae-MIR1135: 1e-31

PMRD tae-miR1135: 1e-31

microPC miR1128: 2e-36		UniProt no hits

RFAM MIR1122: 4e-35		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
degradome data
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