miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST005971
species:
Triticum aestivum
miRNA family:
MIR1439
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGAACGGAGGGAGTATG
miRNA*
ACTCCCTCCGTTCTAAAATA
mismatches:
1
bulges:
0
View larger
pre-miRNA
ACATATTGTACT
ACTCCCTCCGTTCTAAAATA
GATGACCCAACTTTGTATTAATTTTGTACTAAAGCTAGTATAAAATTGAGTCATCTA
TTTTGGAACGG
AGGGAGTATG
TATTAGCCG
dot-bracket secondary structure
.......(((((
((((((((((((((((((((
((((((.(((.(((((((((.(((((...))))).))))))))).))).))))))))
)))))))))))
)))))))).)
)))......
SIMILARITIES
miRBase
tae-MIR1137
:
0.000000000000007
PMRD
ata-miR1120
:
7e-24
microPC
miR1137
:
0.000000000000002
UniProt
no hits
RFAM
MIR1122: 9e-30
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record