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Species belonging to selected taxon:
Aquilegia formosa x Aquilegia pubescens
ABOUT THIS RECORD
ID:
MNEST000060
species:
Aquilegia formosa x Aquilegia pubescens
miRNA family:
miR166d
source:
miRNEST
Taxonomy by NCBI:
Aquilegia formosa x Aquilegia pubescens
Aquilegia
Ranunculaceae
Ranunculales
stem eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGAATGTTGTCTGGCTCGAGG
miRNA*
GTCGGACCAGGCTTCATTCCCC
mismatches:
3
bulges:
1
View larger
pre-miRNA
ATTGGAAGCTTTCTTTTTGAGA
GGAATGTTGTCTGGCTCGAGG
CCACTAACTTAACAACTCTTAATTGAAACTCTATCTATAACCGGTTAGCAAGTGAAA
GCGCTTGTGCGCGCTGGTGTTTGTTTGTTTGTGTC
GTCGGACCAGGCTTCATTCCCC
TCAATTACAGTTTCTACTC
dot-bracket secondary structure
..((((((((......(((((.
((((((..((((((.((((((
(.((.(((..(((((........................((((((..(((((((...
.)))))))....))))))..))))).))).)))))
.)))).))))))..)))))).)
))))....))))))))...
SIMILARITIES
miRBase
aqc-MIR166e
:
3e-70
PMRD
aqc-miR166e
:
3e-70
microPC
miR166
:
0.0000000006
UniProt
no hits
RFAM
mir-166: 0.00000004
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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