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Species belonging to selected taxon:
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST006018
species:
Triticum aestivum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGAGTTACTCCCTCCGTCCGG
miRNA*
GGACGGAGGGAGTATATAT
mismatches:
2
bulges:
2
View larger
pre-miRNA
GTCCCCTCCTTTAGCTGGCTT
AGAGTTACTCCCTCCGTCCGG
AATTATTTGTCATCAAAATGGATGGAAATGGATGTATCTACAACTAAAATACATCTAG
ATACATCCATTTCAATGACAAGTATTTCC
GGACGGAGGGAGTATATAT
ATATATATGGAG
dot-bracket secondary structure
.....((((..((..((...(
(....((((((((((((((((
((.((((((((((..(((((((((....(((((((((...........))))))))).
...)))))))))..)))))))))).))))
))))))))))))))..)).
.))..)).))))
SIMILARITIES
miRBase
tae-MIR1128
:
1e-16
PMRD
ata-miR1122
:
4e-20
microPC
miR1133
:
7e-31
UniProt
no hits
RFAM
MIR1122: 1e-35
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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