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Species belonging to selected taxon:
Euphorbia esula
,
Hevea brasiliensis
,
Jatropha curcas
,
Linum usitatissimum
,
Manihot esculenta
,
Populus deltoides
,
Populus euphratica
,
Populus nigra
,
Populus tremula
,
Populus tremula x Populus alba
,
Populus tremula x Populus tremuloides
,
Populus tremuloides
,
Populus trichocarpa x Populus nigra
,
Populus x canadensis
,
Bruguiera gymnorhiza
,
Populus trichocarpa
,
Ricinus communis
,
Populus trichocarpa x Populus deltoides
ABOUT THIS RECORD
ID:
MNEST000602
species:
Euphorbia esula
miRNA family:
MIR169
source:
miRNEST
Taxonomy by NCBI:
Euphorbia esula
Euphorbia
Euphorbieae
Euphorbioideae
Euphorbiaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGCCAAGGATGACTTGCCCG
miRNA*
GGCAGTCTCCTTGGCTATG
mismatches:
0
bulges:
2
View larger
pre-miRNA
TGTTTGAAGAGAAAGCCTTGCATGAGGAGATAAAGTTGTGTTTGG
TAGCCAAGGATGACTTGCCCG
CTCCATTATAATACAGGTTTTTTTTTTGAAAATC
CTAATTTAATCTAAACCTTTAGAGTCTGGGAGATCGAACTCCAGACCTCTCACTTTCTAATGGAGTAGAATAATCACCAGGCCAAGCCTTGGGTGGGTAT
TATAATACAGGCTTCAGTTGCAATAGATTAGAGACCTTTTTTTTATGGGCCACG
GGCAGTCTCCTTGGCTATG
CTGACCAACTTTTCTCTCTCTAGCAAG
GCTCCATCTCTTCTG
dot-bracket secondary structure
.....(((((((.((((((((..(((((((.(((((((.(((..(
((((((((((.((((.(((((
.((((((((((((((((.(((((....))))).)
))...(((.((((..((.((((((..((((((.((........)).))))))..)))))).))..)))).)))(((((((((...))))..)))))))))
))))....((((((.((((......)))).))).))).......)))))...))
)))))))))))))))))).
..)))))))))))))).)))..)))))
)))...)))))))..
SIMILARITIES
miRBase
ptc-MIR169v
:
0.00000000007
PMRD
ptc-miR169v
:
0.00000000007
microPC
miR169
:
0.0003
UniProt
no hits
RFAM
MIR169_5: 0.00000000008
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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