miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Euphorbia esula



ABOUT THIS RECORD

ID: MNEST000605
species: Euphorbia esula
miRNA family: MIR157
source: miRNEST

Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTGACAGAAGAGAGTGAGCAC

miRNA*
 GCTCACTCTCTATCTGTCACCC

mismatches: 0
bulges: 1
View larger
pre-miRNA
 AAATGATAAGGGTACAGGGCGGTGACAGAAGAGAGTGAGCACCCATGGTCTTTTCCTGCATATATCATTTTATGCTCGAAGCTATGTGTGCTCACTCTCT
ATCTGTCACCCCCGCCTCTCTCTCTCTCT

dot-bracket secondary structure
........((((....(((.((((((((((((((((((((((.((((((...(((..(((((........)))))..))))))))).)))))))))))))
.))))))))))))....))))........


SIMILARITIES
miRBase aly-MIR156f: 7e-18

PMRD ath-miR156f: 0.0000000000004

microPC miR156: 2e-43		UniProt no hits

RFAM mir-156: 0.0000000000005		most similar mature miRNAs

Identical with: miR156 from microPC (MNEST046354)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;