miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Fagus sylvatica, Juglans hindsii x Juglans regia, Quercus petraea, Quercus robur



ABOUT THIS RECORD

ID: MNEST000635
species: Fagus sylvatica
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Fagus sylvatica Fagus Fagaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCATCA

miRNA*
 AAGATGGTGATGTATGGGAAG

mismatches: 1
bulges: 2
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pre-miRNA
 TACCACCATCTTCATCATCATCATCATCATCATTAATATTCAGCACCATCCATCGAAATCCCAGGCTGCTTTAGGGCAAGGGTTTTGGGGTTTATTCTTT
GTCTGAGGGAGGGACTGAGGGAGGGACTAAGGAGTTGATGAAGATGGTGATGTATGGGAAGTAGAAAAG

dot-bracket secondary structure
.........((((.((((((((((((((.((((((((.((.((..((.(((.(((((((((...(((.......)))..)))))))))(((((.((((((
....)))))).)))))..))).))..)).))..)))))))).)))))))))).))))))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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