miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Festuca arundinacea
ABOUT THIS RECORD
ID:
MNEST000638
species:
Festuca arundinacea
miRNA family:
MIR1122
source:
miRNEST
Taxonomy by NCBI:
Festuca arundinacea
Festuca
Loliinae
Poeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGGTACATCCGTATCTAGAT
miRNA*
CAAGATATGGATGTATCTAGT
mismatches:
1
bulges:
0
View larger
pre-miRNA
GTATGTACTCCCTCCGATCCAAATTAATTAACTCTAATTTGT
CAAGATATGGATGTATCTAGT
CAACAAACGTATC
TAGGTACATCCGTATCTAGAT
AAA
GTGGAGTCAATTAATTTGGATCGGAGGGAGTAACAA
dot-bracket secondary structure
...((((((((((((((((((((((((((.((((((.(((((
(.((((((((((((((((((.
..((....))..)
))))))))))))))))).)))
)))
.)))))).))))))))))))))))))))))).))).
SIMILARITIES
miRBase
far-MIR1122
:
0.0004
PMRD
no hits
microPC
miR1122
:
0.00000000000003
UniProt
no hits
RFAM
MIR1122: 0.0000005
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record