ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR1436
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATTTTGGGACGGAGGGAGT miRNA* TCCCTCCGTCCAAAAATTTAT mismatches: 3 bulges: 0 |
pre-miRNA
CAAACAATGTGCTCCCTCCGTCCAAAAATTTATGTCTCAACTTTGGTACAACTTTGTACTAGAGTTAGTACAAAGTTGAGACACTTATTTTGGGACGGAG
GGAGTATAAGATAA
dot-bracket secondary structure
.......((((((((((((((((.(((((...(((((((((((((.((((((((((...))))))).))))))))))))))))...))))).))))))))
))))))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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CAAACAATGTGCTCCCTCCGTCCAAAAATTTATGTCTCAACTTTGGTACAACTTTGTACTAGAGTTAGTACAAAGTTGAGACACTTATTTTGGGACGGAG
GGAGTATAAGATAA
dot-bracket secondary structure
.......((((((((((((((((.(((((...(((((((((((((.((((((((((...))))))).))))))))))))))))...))))).))))))))
))))))))......
SIMILARITIES| miRBase tae-MIR1137: 0.0000000004 PMRD hpr-miR1120: 0.0000000000004 microPC miR1439: 6e-18 | UniProt no hits RFAM MIR1122: 2e-24 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
