ABOUT THIS RECORDspecies: Aquilegia formosa x Aquilegia pubescens
miRNA family: MIR1027
source: miRNEST
Taxonomy by NCBI:
Aquilegia formosa x Aquilegia pubescens Aquilegia Ranunculaceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTCTCTCTTCTCTTCCAATG miRNA* TGGGAAGAGGAAAGATTGAA mismatches: 5 bulges: 1 |
pre-miRNA
TTTCTCCCCTTCTTCTCTCTTCTCTTCCAATGCCTCATCCATCACACACATCTATTGGAAATGGATGCTTAATCACGGATTTTCCGAGTCTAGCAATTGC
GGGTGATTCCCCCCAAAGAAAAATGGGAAGAGGAAAGATTGAAATTAAAAG
dot-bracket secondary structure
.........(((...(((.(((((((((.((...((.(((((..((.........))...)))))((((......((((...)))).....)))).(((.
(((......))).))).))...)).))))))))).)))..)))........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTTCTCCCCTTCTTCTCTCTTCTCTTCCAATGCCTCATCCATCACACACATCTATTGGAAATGGATGCTTAATCACGGATTTTCCGAGTCTAGCAATTGC
GGGTGATTCCCCCCAAAGAAAAATGGGAAGAGGAAAGATTGAAATTAAAAG
dot-bracket secondary structure
.........(((...(((.(((((((((.((...((.(((((..((.........))...)))))((((......((((...)))).....)))).(((.
(((......))).))).))...)).))))))))).)))..)))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
