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Species belonging to selected taxon:
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST006554
species:
Triticum aestivum
miRNA family:
miR857
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGAATGTTGAATTGTGTC
miRNA*
CGCGGNGGCGACAGGCGAGGCG
mismatches:
4
bulges:
1
View larger
pre-miRNA
CGG
CGCGGNGGCGACAGGCGAGGCG
AAATGACGAAGGGAACGGGCAGCTTCGGCAAGCGCCGGNAACAAGNACCCACACGCTGTGCATCCGCTGCGGCCG
CCGCAGCTTCCACCTGCAGAAGAGCACCTGCTCCTCGTGCGGCTACCCCGCCGCCCGCATCCGCAAGTACAACTGGAGTGTGAAGGCCATCAGGNAGGAA
GACCACCGGCACCGGGAGGATGAGGTACATGCGCCATGTGCCCAGGAGGTTCAAGAGCAACTTCAGAGAGGGAACTGAGGCCGCACCAAGGAGCAAGGGA
GCCTCTTCCAGCGGCAACTAGGCGTGACAGTCTCCATTTGTTGCCCTAAGCGAAGCCCTGATCATCAAACTTAGCTTTTTTGTTGTTTTCTACTGGAACT
CTTATGTTTCTATGTTGAGAGGCAGACTATATGATGCCTGGTTATGTTATTTGCACAATTGTCGTGGACGTTAATCCTTCAG
TTTTGAATGTTGAATTGT
GTC
GATGTCCAA
dot-bracket secondary structure
(((
(((((...(((((..((((((.
.......((((((((((.....((.((((((..((.((.((((...(((....(((((((((...(((((((...
))))))).......))))(((((((.(((((((((.((((((((..(((.((.((((..(((((.(((...)))...))).))..(((....((..((..
..)).)))))..)))).)).((.((((((((...)))))))))).((((((.......)))))).....)))......))))))))..)))))).)))..
).)))))))))))(((((.((((.(((..(((....((((((......)))))).....)))..)))......))))....))))).(((.((.(((((.
.....)))))...)).)))(((((..........))))))))..)))).)).))....)))))).)).))))..)))))).)
)))))..)))))..))))
)))
)........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|P49166|RL37A_YEAST: 2e-20
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record