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Species belonging to selected taxon:

Xenopus laevis, Rana catesbeiana, Cynops pyrrhogaster, Ambystoma tigrinum tigrinum



ABOUT THIS RECORD

ID: MNEST006590
species: Xenopus laevis
miRNA family: mir-515
source: miRNEST

Taxonomy by NCBI:
Xenopus laevis Xenopus Xenopus Xenopodinae Pipidae Pipoidea Mesobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAAGTGCTTCCTGTTTTGGGC

miRNA*
 CCAAAACTAAGTTCTCTCT

mismatches: 4
bulges: 2
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pre-miRNA
 ATTTGATATCACCCAAAACTAAGTTCTCTCTTGGGTTCTCTTGATGGTCAGAAAGTGCTTCCTGTTTTGGGCGTTATCGAT

dot-bracket secondary structure
..((((((...((((((((.((((.((.(((.((..((....))...))))).)).))))...))))))))...)))))).


SIMILARITIES
miRBase xtr-mir-427-1: 0.0000009

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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