miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Xenopus laevis, Rana catesbeiana, Cynops pyrrhogaster, Ambystoma tigrinum tigrinum



ABOUT THIS RECORD

ID: MNEST006602
species: Xenopus laevis
miRNA family: miR-1584
source: miRNEST

Taxonomy by NCBI:
Xenopus laevis Xenopus Xenopus Xenopodinae Pipidae Pipoidea Mesobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGGGCTGGGTTGGGGGCAG

miRNA*
 GCACTACCCATTCCCACGC

mismatches: 3
bulges: 2
View larger
pre-miRNA
 GGTGGATCAGGCACAGGTATAAATATGTCCCTTGGGGCTGGGTTGGGGGCAGTTAAGGGTCAGGAAAATCTTGAACATCCCTATAAAAAGTCATATAAAT
GGGGTAAAAGGGTCCACCTTTGCACTACCCATTCCCACGCACTATTTACTACTGGTACCTTTACAAAA

dot-bracket secondary structure
.((((...(((.((.(((((((((((((....(((((.(((((.((..((((....((((..(((...((((......((((((..............))
))))...)))).))))))))))).))))))).))))).))).)))))).)))).)).)))))))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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