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Species belonging to selected taxon:
Festuca arundinacea
,
Festuca pratensis
ABOUT THIS RECORD
ID:
MNEST000668
species:
Festuca arundinacea
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Festuca arundinacea
Festuca
Loliinae
Poeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACATCTTCATCATCATCCTCC
miRNA*
GGGAAGGTCGATCGAAGATGTAT
mismatches:
2
bulges:
2
View larger
pre-miRNA
AGAGAGATCTCAG
GGGAAGGTCGATCGAAGATGTAT
CTCCGGCCACCGCCCAAGGGCCCCCAGTGGGGCGGCCCAGCGGACACGGAGGCGGGGCTTGATG
CGCGGCCGCTGTACCCGATGATGCTGGAGAGCCCGCAGCTGCGTTGGGCGTTCGTCCGCAAGGTGTACACCATCCTCTCCATCCAGATGCTGCTCACCAT
CGCCGTCGCCTCCGTCGTCGTCTTCGTGCGCCCCGTCGCGCTCTTCTTCGTATCCTCCCCCGGCGGCTTCGGCCTCT
ACATCTTCATCATCATCCTCC
CG
TTCATCGT
dot-bracket secondary structure
(((....)))..(
((((.(((.(((.((((((((((
(((((....((((....((((((((....))).))))).))))...))))))(((((..(((.(
((((((.((.((((..(((((((.(((((.((..((.(((((...((((....))))))).((((..((.((((...........)))).))..))))..
.)).)).))))))).)))))))...))))))...)))))))......))).......)))))..(((....)))..)
)))))))))))))).))))).
..
........
SIMILARITIES
miRBase
no hits
PMRD
ghr-miR414e
:
0.00006
microPC
no hits
UniProt
sp|Q94A20|BI1L_ARATH: 0.0005
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record