ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: miR-4289
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCATTGTGCAGGTCTATCAGA miRNA* TGCTGGGCCTGTGAGAAAGCTG mismatches: 3 bulges: 1 |
pre-miRNA
AGCAATGGGTTCTGCTGGGCCTGTGAGAAAGCTGGATTTCGATGTAATATTGCCAGGACGCCCGAGTCTGCACTGGAATGTTTTCTTGATAAACACCATG
AAATTATCATCATAGAACCATAGACATTCCAGATACTTTGATGCGGAAGCATTGTGCAGGTCTATCAGAACAAAAAAA
dot-bracket secondary structure
........((((((.((((((((((..((.(((.....((((.(((....(((..((((......)))))))((((((((((((((((((((........
...))))))....)))).....)))))))))).))).))))......))).)).)))))))))).)))))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AGCAATGGGTTCTGCTGGGCCTGTGAGAAAGCTGGATTTCGATGTAATATTGCCAGGACGCCCGAGTCTGCACTGGAATGTTTTCTTGATAAACACCATG
AAATTATCATCATAGAACCATAGACATTCCAGATACTTTGATGCGGAAGCATTGTGCAGGTCTATCAGAACAAAAAAA
dot-bracket secondary structure
........((((((.((((((((((..((.(((.....((((.(((....(((..((((......)))))))((((((((((((((((((((........
...))))))....)))).....)))))))))).))).))))......))).)).)))))))))).)))))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|O95263|PDE8B_HUMAN: 1e-17 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
