ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: miR-3533
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGAAGTGTGATGTGGATATC miRNA* ATCCATGAAACTACCTTCAACT mismatches: 4 bulges: 2 |
pre-miRNA
TTTAGTCCTGTGGTATCCATGAAACTACCTTCAACTCCATCATTGAAGTGTGATGTGGATATCCGTAAAGGATCTGTATGCC
dot-bracket secondary structure
....(((((.(((((((((((..((...((((((........)))))).))..)))))))).)))...))))).........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTAGTCCTGTGGTATCCATGAAACTACCTTCAACTCCATCATTGAAGTGTGATGTGGATATCCGTAAAGGATCTGTATGCC
dot-bracket secondary structure
....(((((.(((((((((((..((...((((((........)))))).))..)))))))).)))...))))).........
SIMILARITIES| miRBase gga-mir-3533: 5e-30 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
