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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Lolium perenne



ABOUT THIS RECORD

ID: MNEST000677
species: Festuca pratensis
miRNA family: MIR1132
source: miRNEST

Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATTATGGAACGGAGGGAGTA

miRNA*
 CTCTCTCTGATCCATAATAAG

mismatches: 1
bulges: 0
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pre-miRNA
 TCTCTATTCGGGGACAAAAAATACTCTCTCTGATCCATAATAAGTTTCATGGTTTTAGTTTAGATTTGAACTAAAACCATGACCTTTATTATGGAACGGAG
GGAGTAGGAATTTTTTGGCAATCAT

dot-bracket secondary structure
)((((....)))).((((((((((((((((((.(((((((((((..((((((((((((((((....))))))))))))))))..))))))))))).)))))
))))))....)))))))........


SIMILARITIES
miRBase bdi-MIR5181a: 0.0004

PMRD psa-miR1120: 3.0E-11

microPC miR1132: 1.0E-10		UniProt no hits

RFAM 2MIR1122: 2.0E-12		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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