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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000678
species: Festuca pratensis
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Festuca pratensis Festuca Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTACTCCCTCCGTTCCATAAT

miRNA*
 TATGGATCAGAGAGAGTATTT

mismatches: 5
bulges: 0
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pre-miRNA
 ATGATTTGCCAAAAAATTCCTACTCCCTCCGTTCCATAATAAAGGTCATGGTTTTAGTTCAAATCTAAACTAAAACCATGAAACTTATTATGGATCAGAG
AGAGTATTTTTTGTCCCCGAATAGA

dot-bracket secondary structure
...(((((.(((((((....(((((.(((...((((((((((...((((((((((((((........))))))))))))))...))))))))))...)))
.))))))))))))....)))))...


SIMILARITIES
miRBase bdi-MIR5181a: 0.0004

PMRD psa-miR1120: 0.00000000003

microPC miR1132: 0.0000000001		UniProt no hits

RFAM MIR1122: 0.000000000002		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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