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Species belonging to selected taxon:

Gallus gallus, Anolis carolinensis, Taeniopygia guttata, Meleagris gallopavo, Lonchura striata domestica



ABOUT THIS RECORD

ID: MNEST006798
species: Gallus gallus
miRNA family: mir-181
source: miRNEST

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AACATTCATTGCTGTCGGTG

miRNA*
CTGATCAATGAATGCAAA

mismatches: 2
bulges: 2

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pre-miRNA
CAGCATCTAATGGCTGCAATCAACATTCATTGCTGTCGGTGGGTTTTCATTGCTATCAACTCACTGATCAATGAATGCAAACTTGCGGACCAGCTGGCT

dot-bracket secondary structure
.(((......(((((((((....(((((((((..(((((((((((............)))))))))))))))))))).....)))))).)))....)))


SIMILARITIES
miRBase gga-mir-181b-2: 7e-39

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-181: 0.00000002
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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